Browse Skills — Page 184

merge-review

SethGammon/Citadel

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merger-model

NousResearch/hermes-agent

Build accretion/dilution (merger) models in Excel — pro-forma P&L, synergies, financing mix, EPS impact. Pairs with excel-author. Use for M&A pitches, board materials, or deal evaluation.

merger-model

anthropics/financial-services

Build accretion/dilution analysis for M&A transactions. Models pro forma EPS impact, synergy sensitivities, and purchase price allocation. Use when evaluating a potential acquisition, preparing merger consequences analysis for a pitch, or advising on deal terms. Triggers on "merger model", "accretion dilution", "M&A model", "pro forma EPS", "merger consequences", or "deal impact analysis".

mermaid

partme-ai/full-stack-skills

"Create Mermaid diagrams for Markdown documentation including flowcharts, sequence diagrams, class diagrams, state diagrams, ER diagrams, Gantt charts, pie charts, mindmaps, timelines, C4 diagrams, and 20+ other diagram types. Use when the user wants to draw, create, or visualize diagrams in Markdown-friendly format, mentions Mermaid, needs diagrams for GitHub/GitLab/wikis, or wants quick diagrams that render directly in Markdown renderers."

mermaid-diagram

wanshuiyin/Auto-claude-code-research-in-sleep

Generate Mermaid diagrams from user requirements. Saves .mmd and .md files to figures/ directory with syntax verification. Supports flowcharts, sequence diagrams, class diagrams, ER diagrams, Gantt charts, and 18 more diagram types.

mermaid-diagrams

langchain-ai/openwiki

Embed Mermaid diagrams in generated wiki pages. Use whenever documenting a runtime or request flow, a call sequence, a state machine or lifecycle, a data model or entity relationships, or non-trivial control flow, since these are clearer as a diagram than as prose. Also use when an update run touches a page that already contains a mermaid fence, or a page that contains a text fence a previous run degraded.

mermaid-expert

benjaminasterA/antigravity-awesome-skills

Create Mermaid diagrams for flowcharts, sequences, ERDs, and

mermaid-expert-v2

diegosouzapw/awesome-omni-skills

mermaid-expert workflow skill. Use this skill when the user needs Create Mermaid diagrams for flowcharts, sequences, ERDs, and architectures. Masters syntax for all diagram types and styling and the operator should preserve the upstream workflow, copied support files, and provenance before merging or handing off.

mermaid-skill

Agents365-ai/mermaid-skill

Generate Mermaid diagrams (.mmd) and export to PNG/SVG/PDF using mmdc CLI or Kroki API. USE THIS SKILL when user mentions diagram, flowchart, sequence diagram, class diagram, ER diagram, state machine, architecture, visualize, git graph, 画图, 架构图, 流程图, 时序图. PROACTIVELY USE when explaining ANY system with 3+ components, API flows, authentication sequences, class hierarchies, database schemas, or state machines. Supports 12+ diagram types with fully automatic layout.

mermaid-studio

tech-leads-club/agent-skills

Expert Mermaid diagram creation, validation, and rendering with dual-engine output (SVG/PNG/ASCII). Supports all 20+ diagram types including C4 architecture, AWS architecture-beta with service icons, flowcharts, sequence, ERD, state, class, mindmap, timeline, git graph, sankey, and more. Features code-to-diagram analysis, batch rendering, 15+ themes, and syntax validation. Use when users ask to create diagrams, visualize architecture, render mermaid files, generate ASCII diagrams, document system flows, model databases, draw AWS infrastructure, analyze code structure, or anything involving "mermaid", "diagram", "flowchart", "architecture diagram", "sequence diagram", "ERD", "C4", "ASCII diagram". Do NOT use for non-Mermaid image generation, data plotting with chart libraries, or general documentation writing.

mermaid-syntax

tractorjuice/arc-kit

This skill should be used when the user asks about Mermaid diagram syntax, how to write flowchart, sequence, class, state, ER, Gantt, C4, mindmap, timeline, or other diagram types, node shapes, styling, theming, or rendering errors.

mermaid-to-proverif

trailofbits/skills

Translates Mermaid sequenceDiagrams describing cryptographic protocols into ProVerif formal verification models (.pv files). Use when generating a ProVerif model, formally verifying a protocol, converting a Mermaid diagram to ProVerif, verifying protocol security properties (secrecy, authentication, forward secrecy), checking for replay attacks, or producing a .pv file from a sequence diagram.

mermaid-tools

daymade/claude-code-skills

Extracts Mermaid diagrams from markdown files and generates high-quality PNG images using bundled scripts. Activates when working with Mermaid diagrams, converting diagrams to PNG, extracting diagrams from markdown, or processing markdown files with embedded Mermaid code.

mermaid-visualizer

closedloop-ai/claude-plugins

This skill should be used when a user asks to explain a complex idea, concept, or system architecture, or when a diagram would be helpful to visualize control flows, system architectures, data flows, state machines, sequence diagrams, or entity relationships.

mesh-analysis

elizaOS/eliza

Analyzes 3D mesh files (STL) to calculate geometric properties (volume, components) and extract attribute data. Use this skill to process noisy 3D scan data and filter debris.

mesh-converter

microsoft/DirectXMesh

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mesh-generation

swaruplab/operon

Plan and evaluate mesh generation for numerical simulations. Use when choosing grid resolution, checking aspect ratios/skewness, estimating mesh quality constraints, or planning adaptive mesh refinement for PDE discretization.

meshy-3d-agent

meshy-dev/meshy-3d-agent

Generate 3D models, textures, images, rig characters, animate them, and prepare for 3D printing using the Meshy AI API. Handles API key detection, task creation, polling, downloading, and full 3D print pipeline with slicer integration. Use when the user asks to create 3D models, convert text/images to 3D, texture models, rig or animate characters, 3D print a model, or interact with the Meshy API.

meshy-3d-generation

meshy-dev/meshy-3d-agent

Generate 3D models, textures, images, rig characters, and animate them using the Meshy AI API. Handles API key detection, setup, and all generation workflows via direct HTTP calls. Use when the user asks to create 3D models, convert text/images to 3D, texture models, rig or animate characters, or interact with the Meshy API.

meshy-3d-printing

meshy-dev/meshy-3d-agent

3D print models generated with Meshy AI, plus Creative Lab consumer products. Handles slicer detection, white model printing, multi-color printing via API, the Creative Lab pipeline (figure / lamp / keychain / fridge-magnet), and print-optimized download workflows. Use when the user mentions 3D printing, slicing, Bambu, OrcaSlicer, Prusa, Cura, Creality Print, Elegoo, Anycubic, multicolor, multi-color, 3mf, Creative Lab, or wants a figurine, keychain, fridge magnet, lamp, collectible, miniature, or physical product from a photo.

message-house-builder

aaron-he-zhu/aaron-marketing-skills

Use when the user asks to "build a message house", "write a PR-FAQ for our launch", or "define the launch narrative and value pillars"; derives from the positioning canvas a message house — tagline, one-liner, three value pillars, per-persona proof points (each labeled Measured / User-provided / [needs source]) — plus a working-backwards PR-FAQ narrative spine (launch-day tense, empty-chair test, five external + five internal FAQs) and per-channel message angle packs (angles, not finished copy). Not for the positioning canvas itself — use positioning-mapper; not for finished blog posts or pages — use content-writer; not for ad or email units — use each discipline creative builder; not for claim adjudication — use offer-claims-registry. 消息屋/PR-FAQ/价值支柱/发布叙事

message-system-architect

aaron-he-zhu/aaron-marketing-skills

Use when the user asks to "author our durable brand message hierarchy", "build the brand message house that seeds the canon", or "define the main narrative, three pillars, and tagline for the whole brand"; produces the DURABLE brand message system — main narrative, three value pillars, per-persona proof points (each labeled Measured / User-provided / ''[needs source]''), and the tagline/one-liner — that seeds the narrative-registry canon and from which every per-launch house derives. Not for a single launch''s message house or PR-FAQ — use message-house-builder; not for claim adjudication — use offer-claims-registry; not for the change-narrative arc itself — use strategic-narrative-designer. 品牌消息屋/主叙事/三支柱/标语/持久叙事 canon

message-test

indranilbanerjee/digital-marketing-pro

Test message variants on synthetic audiences. Use when: predicting response rates, sentiment, or objections before live tests.

message-test-designer

aaron-he-zhu/aaron-marketing-skills

Use when the user asks to "test our messaging before we scale it", "design a message-market-fit panel", or "run a 5-second comprehension test on our new tagline"; produces a message-test design spec — hypothesis, panel and recruit criteria, comprehension / 5-second / message-market-fit (Wynter-style) protocols, stimulus set drawn from the canon, success thresholds, and a stop/revise decision rule — for the TALE Evaluate phase so the message is validated before any paid scale. It designs the test; it never runs the experiment or adjudicates a claim. Not for running the panel or A/B experiment — use send-experiment-designer or ad-test-designer; not for analyzing the results — use performance-analyzer; not for authoring the message itself — use message-system-architect. 消息测试/理解度测试/面板设计/五秒测试/消息市场契合

messages

github/gh-aw

Add new safe-output message types and wire validation/rendering.

messages-ops

affaan-m/ECC

Evidence-first live messaging workflow for ECC. Use when the user wants to read texts or DMs, recover a recent one-time code, inspect a thread before replying, or prove which message source was actually checked.

messaging

vellum-ai/vellum-assistant

Read, search, send, and manage messages across Gmail, Outlook, Telegram, and other platforms

messaging-ab-tester

gooseworks-ai/goose-skills

>

messaging-and-tone-matrix

Significant-Gravitas/skills-catalog

Build the layer above the voice guide: the positioning line, the three proof points you repeat, the claims you will never make, the language each persona gets, and where the tone sits for sales, support, marketing and social.

messe-verletzung-und-gv-einsatz

Klotzkette/claude-fuer-deutsches-recht

Markenverletzung auf Messen (Pitti Uomo/Berlin Fashion Week): Eilantrag §§ 935/940 ZPO, einstweilige Verfuegung, Schutzschrift, Gerichtsvollzieher-Sicherstellung, Auskunftsanspruch § 19 MarkenG, Vernichtungsanspruch § 18 MarkenG. Laedt, wenn der Nutzer 'Messe Verletzung', 'GV Sicherstellung', 'einstweilige Verfuegung Marke', 'Schutzschrift' oder 'Pitti Uomo Abmahnung' sagt.

messenger_read

obra/muse-skills

Work with the user's Messenger account: read call history; read and search contacts; read, search, and summarize conversations; send, react to, unsend, or edit messages; and message Marketplace listing threads.

meta_ads

obra/muse-skills

Create, write, or manage Meta ads and assets: ad copy, campaigns, spend, reports, audiences, catalogs, product feeds, feed refresh schedules, experiments, and policy. Always load for any request to create or write an ad, or to advertise a product or service, even when no platform is named; this includes sensitive or restricted categories. Always load for any question asking what a Meta, Facebook, or Instagram advertising policy means, allows, prohibits, or requires, including a standalone policy-definition question with no account context. Those questions must use ads_policy_tool, never browser search or memory. Load for a specifically named catalog or feed with an upload or refresh-schedule request; use Ads reads to resolve ownership before writing. Generic unnamed feeds need context. Whether an image, claim or piece of copy may be used in an ad is ALWAYS a Meta Ads task — 'can I use this in an ad', 'is it allowed', 'is this against policy', and any rights, likeness, celebrity, logo or trademark question about advertising with an image, including a follow-up about one just generated. Those are ads-policy questions, not general legal ones. An ad request uses the campaign workflow unless explicitly only an image or organic post.

meta-abstract-screener

aipoch/medical-research-skills

Screens research papers based on title/abstract and inclusion criteria, providing a structured Yes/No/Maybe decision. Use when you need to filter literature for meta-analysis or systematic reviews.

meta-ads

kostja94/marketing-skills

When the user wants to set up, optimize, or manage Meta (Facebook/Instagram) Ads. Also use when the user mentions "Meta Ads," "Facebook Ads," "Instagram Ads," "Meta Pixel," "Conversions API," "Advantage+," "lookalike audience," or "Meta retargeting." For landing pages, use landing-page-generator.

meta-ads-analyzer

modu-ai/cowork-plugins

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meta-ads-campaign-builder

gooseworks-ai/goose-skills

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meta-ads-expert

Varnan-Tech/opendirectory

Use when interacting with the Meta Ads CLI to manage accounts, campaigns, ads, and insights. Act as an Expert Media Buyer.

meta-ads-library

hyperfx-ai/marketing-skills

Research competitor Facebook and Instagram ads from the Meta Ads Library via the Hyper MCP — search by keyword, pull full ad creative and metadata, enrich with page contact info for lead generation, and surface structured ad-intelligence summaries in chat. Use when the user wants to scrape the Meta Ads Library, spy on competitor ads, monitor new ads in a category, build a lead list from advertisers, or surface creative trends across an industry.

meta-ads-manager

modu-ai/cowork-plugins

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meta-analysis

yogsoth-ai/de-anthropocentric-research-engine

Cross-Study Statistical Synthesis Campaign — 5 strategies for systematic collection and methodological planning of multi-study evidence synthesis. Covers pairwise, network, cumulative meta-analysis, heterogeneity investigation, and bias detection. Stops at protocol design (no computation).

meta-analysis-execution

InternScience/scp

Perform meta-analysis on scientific studies to synthesize research findings and generate comprehensive reports with statistical summaries.

meta-analysis-methods-generator

aipoch/medical-research-skills

Generates the Methods section for a meta-analysis paper, including search strategy, screening, quality assessment, data extraction, and statistical analysis.

meta-analysis-synthesis

yogsoth-ai/de-anthropocentric-research-engine

Produce final meta-analysis protocol document assembling all planning outputs into PRISMA-compliant protocol

meta-baseline-generator

aipoch/medical-research-skills

Generates a meta-analysis baseline characteristics section (text + table) from raw data. Supports Chinese and English. Use when the user provides baseline data and wants a formatted results section.

meta-baujat-plot

aipoch/medical-research-skills

Generate Baujat plots for heterogeneity analysis. Identify studies that contribute most to the overall meta-analysis results and heterogeneity, helping discover potential outlier studies. Input meta-analysis data CSV, output Baujat plot PNG and contribution data CSV.

meta-cognition

aAAaqwq/AGI-Super-Team

Meta-cognitive framing for analyze-before-doing, ownership routing, risk gating, minimum-closure planning, and retrospective extraction in multi-agent work. Use when the user says 先分析再做 / 先别动手 / 先判断 / 先定方案, when work spans multiple agents or needs dispatch/orchestration, when CEO-style delegation or group command requires owner+deadline+closure, when abnormal sessions/cron/jobs/runs need real follow-through instead of status-only reporting, or when a task needs strategy, PRD, first-principles thinking, verification, and postmortem/retro.

meta-criteria-generator

aipoch/medical-research-skills

Generates scientifically sound inclusion and exclusion criteria for Meta-Analysis based on a given title or keywords. Use when user wants to design eligibility criteria for a systematic review or meta-analysis.

meta-description

kostja94/marketing-skills

When the user wants to optimize the meta description or meta tag description. Also use when the user mentions "meta description," "meta desc," "page description," "SEO description," "search snippet," "SERP description," "description tag," "snippet for search," "meta description length," "rewrite meta description," or "description not showing." For title tag, use title-tag. For hreflang, robots, viewport, use page-metadata.

meta-feasibility-analyzer

aipoch/medical-research-skills

Analyzes the feasibility of a proposed Meta-analysis topic by searching for existing Meta-analyses and Clinical Trials on PubMed/ClinicalTrials.gov. Use when you need to evaluate if a topic is viable for a new Meta-analysis.

meta-forest-binary-plot

aipoch/medical-research-skills

Generate meta-analysis forest plots for binary classification data. Input is a CSV file containing study names, event counts and sample sizes for experimental and control groups. Output includes forest plot PNG and data table CSV.

meta-forest-continuous-plot

aipoch/medical-research-skills

Generate forest plots for meta-analysis of continuous data. Input a CSV file containing study names, means, standard deviations, and sample sizes for experimental and control groups. Output forest plot PNG and data table CSV.

meta-forest-model-plot

aipoch/medical-research-skills

Generate forest plots for meta-analysis of survival data. Input is a CSV file containing study names, HR and 95% confidence intervals, output forest plot PNG and data table CSV. Supports both R and Python scripts.

meta-funnel-plot

aipoch/medical-research-skills

Generate Meta-analysis funnel plots and perform publication bias testing. Takes CSV file with Meta-analysis data as input, outputs funnel plot PNG, Egger test and Begg test results.

meta-manuscript-generator

aipoch/medical-research-skills

Generates a first draft of a clinical meta-analysis paper. Input the research report (including Methods and Results sections), language, and title to automatically generate a complete paper draft including Abstract, Introduction, Discussion, and other sections, with automatic PubMed retrieval of relevant references. Suitable for assisting in the writing of systematic reviews and meta-analyses.

meta-operations

SteelMorgan/1c-agent-based-dev-framework

Операции с объектами метаданных 1С (23 типа) — compile, info, edit, validate, remove. Используй при создании справочников, документов, регистров, перечислений и других объектов конфигурации.

meta-optimize

wanshuiyin/Auto-claude-code-research-in-sleep

Analyze ARIS usage logs and propose optimizations to SKILL.md files, reviewer prompts, and workflow defaults. Outer-loop harness optimization inspired by Meta-Harness (Lee et al., 2026). Use when user says \"优化技能\", \"meta optimize\", \"improve skills\", \"分析使用记录\", or wants to optimize ARIS's own harness components based on accumulated experience.

Meta-Pattern Recognition

obra/superpowers-skills

Spot patterns appearing in 3+ domains to find universal principles

Meta-Pattern Recognition

aAAaqwq/AGI-Super-Team

Spot patterns appearing in 3+ domains to find universal principles

meta-picos-generator

aipoch/medical-research-skills

Generates PI(E)COS structure (Population, Intervention, Comparator, Outcomes, Study Design) from Meta-analysis or study titles. Use when the user wants to extract these elements from a title.

meta-prompt-engineering

lyndonkl/claude

Transforms vague or unreliable prompts into structured, constraint-aware prompts with explicit roles, task decomposition, output formats, and quality checks. Use when prompts produce inconsistent outputs, need explicit structure and constraints, require safety guardrails, involve multi-step reasoning that needs decomposition, need domain expertise encoding, or when user mentions improving prompts, prompt templates, structured prompts, prompt optimization, reliable AI outputs, or prompt patterns.

meta-protocol-writer

aipoch/medical-research-skills

Generates a PROSPERO-compliant Meta-analysis protocol based on Title and PICOS. Use when the user wants to write a protocol for a systematic review or meta-analysis.

meta-radial-plot

aipoch/medical-research-skills

Generate radial plots (Radial Plot/Galbraith Plot) for heterogeneity analysis. Visually assess heterogeneity across studies by displaying the relationship between standardized effect sizes and precision. Input: Meta-analysis data in CSV format; Output: Radial plot PNG and data CSV.

meta-results-forest-plot-analyzer

aipoch/medical-research-skills

Analyzes forest plots for meta-analysis, generating detailed descriptions and formatting figure legends in Chinese or English. Use when the user wants to interpret a forest plot image, describe its statistical significance (heterogeneity, p-value), and format the output with specific figure legends.

meta-results-funnel-plot-generator

aipoch/medical-research-skills

Generates a Meta-analysis results section description for funnel plots, including statistical tables (Egger's, Begg's, Trim & Fill) and figure legends. Supports English and Chinese outputs. Use when user provides a funnel plot image and statistics and wants a formatted report.

meta-results-risk-of-bias

aipoch/medical-research-skills

Generates the "Risk of Bias" results section for a meta-analysis based on assessment tables and statistics. Use when the user wants to draft the risk of bias analysis text from provided data tables.

meta-results-sensitivity-analysis

aipoch/medical-research-skills

Generates the "Results" section for meta-analysis sensitivity analysis based on statistical tables and titles. Use when the user wants to describe sensitivity analysis results or format sensitivity tables for a meta-analysis paper.

meta-rob2-plot

aipoch/medical-research-skills

Draw ROB2 risk-of-bias plots, including a Traffic Light Plot and a Summary Bar Plot. Input is a CSV file with ROB2 assessments for each study; output are two PNG plot files.

meta-screening-fulltext

aipoch/medical-research-skills

Screen full-text papers against inclusion/exclusion criteria, with optional PubMed metadata check using PMID. Use when the user needs to evaluate a paper for a meta-analysis.

meta-search-builder

aipoch/medical-research-skills

Medical literature search strategy generator. Given a user's natural-language description (e.g., meta-analysis topic, PICOS elements, research question), automatically extract medical entities (disease, intervention, population, outcomes) and generate professional search queries for seven major databases (PubMed, Cochrane, Embase, Web of Science, CNKI, Wanfang, VIP). Useful for developing search strategies for systematic reviews and meta-analyses.

meta-sensitivity-plot

aipoch/medical-research-skills

Generate leave-one-out sensitivity analysis plots for meta-analysis. Input is a CSV file containing meta-analysis data; outputs are a sensitivity forest plot (PNG) and a sensitivity data table (CSV) showing pooled effect estimates after excluding each study in turn.

meta-tags

686f6c61/alfred-dev

Auditar y corregir meta tags para SEO y redes sociales. Activar ante: SEO basico, meta description, Open Graph, Twitter Cards, titulo de pagina, etiquetas meta

meta-tags-optimizer

nowork-studio/NotFair

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meta-title-generator

aipoch/medical-research-skills

Generates Meta-Analysis research titles based on user keywords, utilizing PubMed search results if available, or creative generation otherwise. Use when the user wants to brainstorm or generate titles for a meta-analysis, specifically starting from keywords or a topic.

meta-tribe-skill

Varnan-Tech/opendirectory

Analyzes video hooks and scripts using Meta's TRIBE v2 fMRI model, providing a neuro-marketing breakdown of scroll-stopping power and retention risk.

metaads-automation

ComposioHQ/awesome-claude-skills

"Automate Metaads tasks via Rube MCP (Composio). Always search tools first for current schemas."

metabase

vm0-ai/vm0-skills

Metabase API for business intelligence. Use when user mentions "Metabase",

metabase_ingest

Kaelio/ktx

Convert Metabase questions, models, and metrics into ktx Semantic Layer source definitions. Covers result-metadata to KSL column type mapping, FK/PK detection, near-duplicate deduplication, pre-aggregation decomposition, join-graph connectivity, and how to react to priorProvenance from earlier ingest syncs. Load when the WorkUnit contains `cards/<id>.json` files under a Metabase bundle.

metabolights-skill

openai/plugins

Submit compact MetaboLights requests for study discovery and study-level metabolomics metadata. Use when a user wants concise MetaboLights summaries

metabolomics_pathway

InternScience/scp

Metabolomics Pathway Analysis - Analyze metabolomics: compound identification, KEGG pathway mapping, enzyme links, and PubChem data. Use this skill for metabolomics tasks involving search pubchem by name kegg find kegg link kegg get. Combines 4 tools from 2 SCP server(s).

metabolomics-lipidomics

swaruplab/operon

Specialized lipidomics analysis for lipid identification, quantification, and pathway interpretation. Covers LC-MS lipidomics with LipidSearch, MS-DIAL, and LipidMaps annotation. Use when analyzing lipid classes, chain composition, or lipid-specific pathways.

metabolomics-metabolite-annotation

swaruplab/operon

Metabolite identification from m/z and retention time. Covers database matching, MS/MS spectral matching, and confidence level assignment. Use when assigning compound identities to detected features in untargeted metabolomics.

metabolomics-msdial-preprocessing

swaruplab/operon

MS-DIAL-based metabolomics preprocessing as alternative to XCMS. Covers peak detection, alignment, annotation, and export for downstream analysis. Use when processing MS-DIAL output files for R/Python analysis or when preferring GUI-based preprocessing.

metabolomics-normalization-qc

swaruplab/operon

Quality control and normalization for metabolomics data. Covers QC-based correction, batch effect removal, and data transformation methods. Use when correcting technical variation in metabolomics data before statistical analysis.

metabolomics-pathway-mapping

swaruplab/operon

Map metabolites to biological pathways using KEGG, Reactome, and MetaboAnalyst. Perform pathway enrichment and topology analysis. Use when interpreting metabolomics results in the context of biochemical pathways.

metabolomics-statistical-analysis

swaruplab/operon

Statistical analysis for metabolomics data. Covers preprocessing (log2 transformation, normalization), limma moderated testing with empirical Bayes, Welch's t-tests with BH correction, fold change estimation, and multivariate methods (PCA, PLS-DA, OPLS-DA). Use when identifying differentially abundant metabolites or building classification models.

metabolomics-targeted-analysis

swaruplab/operon

Targeted metabolomics analysis using MRM/SRM with standard curves. Covers absolute quantification, method validation, and quality assessment. Use when quantifying specific metabolites using calibration curves and internal standards.

metabolomics-workbench-database

jaechang-hits/SciAgent-Skills

Query Metabolomics Workbench REST API (4,200+ NIH studies) for metabolite ID, study discovery, RefMet standardization, m/z precursor searches, and gene/protein annotations. Quirks: compound input_item rejects `name` (use pubchem_cid/kegg_id/inchi_key/etc.); free-text → compound is a two-step refmet/match→refmet/name flow; moverz endpoint returns TSV text, not JSON. Use hmdb-database for local XML; pubchem-compound-search for general compound lookup.

metabolomics-xcms-preprocessing

swaruplab/operon

XCMS3 workflow for LC-MS/MS metabolomics preprocessing. Covers peak detection, retention time alignment, correspondence (grouping), and gap filling. Use when processing raw LC-MS data into a feature table for untargeted metabolomics.

metacognitive-monitoring

Tibsfox/gsd-skill-creator

Active supervision of the problem-solving process. Covers Schoenfeld's control layer, Ann Brown's self-regulation moves, planning-monitoring-evaluating cycle, time budgeting, strategy switching, and the "what am I doing and why?" check. Use continuously alongside any solving activity to avoid wandering, dead ends, and unproductive grinding.

metadata-discovery

SteelMorgan/1c-agent-based-dev-framework

Работа с метаданными (Metadata Discovery). Навык учит агента **работать с метаданными конфигурации 1С** — находить объекты (справочники, документы, регистры, обработки), понимать их структуру и связи.

metadata-updater

MicrosoftDocs/cloud-adoption-framework

Updates YAML frontmatter (ms.date, ms.service) after substantive content changes. Use when asked to update metadata or ms.date.

metagenomic-krona-chart

aipoch/medical-research-skills

Analyze data with `metagenomic-krona-chart` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

metagenomics-abundance

swaruplab/operon

Species abundance estimation using Bracken with Kraken2 output. Redistributes reads from higher taxonomic levels to species for more accurate estimates. Use when accurate species-level abundances are needed from Kraken2 classification output.

metagenomics-amr-detection

swaruplab/operon

Detect antimicrobial resistance genes using AMRFinderPlus, ResFinder, and CARD. Screen isolates and metagenomes for resistance determinants. Use when characterizing resistance profiles in clinical isolates, surveillance samples, or metagenomic data.

metagenomics-functional-profiling

swaruplab/operon

Profile functional potential of metagenomes using HUMAnN3 and similar tools. Use when obtaining pathway abundances, gene family counts, or functional annotations from metagenomic data.

metagenomics-kraken

swaruplab/operon

Taxonomic classification of metagenomic reads using Kraken2. Fast k-mer based classification against RefSeq database. Use when performing initial taxonomic classification of shotgun metagenomic reads before abundance estimation with Bracken.

metagenomics-metaphlan

swaruplab/operon

Marker gene-based taxonomic profiling using MetaPhlAn 4. Provides accurate species-level relative abundances using clade-specific markers. Use when accurate taxonomic profiling is needed and computational resources are limited, or for comparison with HMP/other MetaPhlAn studies.

metagenomics-strain-tracking

swaruplab/operon

Track bacterial strains using MASH, sourmash, fastANI, and inStrain. Compare genomes, detect contamination, and monitor strain-level variation. Use when needing sub-species resolution for outbreak tracking, transmission analysis, or within-host strain dynamics.

metagenomics-visualization

swaruplab/operon

Visualize metagenomic profiles using R (phyloseq, microbiome) and Python (matplotlib, seaborn). Create stacked bar plots, heatmaps, PCA plots, and diversity analyses. Use when creating publication-quality figures from MetaPhlAn, Bracken, or other taxonomic profiling output.

metaphor-automation

ComposioHQ/awesome-claude-skills

"Automate Metaphor tasks via Rube MCP (Composio). Always search tools first for current schemas."