semantic-scholar-database
$
npx mdskill add aipoch/medical-research-skills/semantic-scholar-databaseSearch papers and traverse citation networks via Semantic Scholar API.
- Retrieves abstracts, venues, and author profiles for scholarly research.
- Integrates with the Semantic Scholar Graph API for data access.
- Executes queries using keywords, identifiers, or citation relationships.
- Returns structured JSON responses containing paper metadata and graph data.
SKILL.md
.github/skills/semantic-scholar-databaseView on GitHub ↗
---
name: semantic-scholar-database
description: Access the Semantic Scholar Graph API to search papers and retrieve paper/author/citation data when you need literature discovery or citation graph exploration.
license: MIT
author: aipoch
---
> **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills)
## When to Use
- You need to find relevant papers by keyword, title, or known identifiers (e.g., Semantic Scholar Paper ID).
- You want to fetch detailed metadata for a paper (abstract, venue, year, fields of study, etc.).
- You need author-centric information such as an author profile and their publications.
- You want to explore a citation network by traversing references or citations for a given paper.
- You are building a literature review workflow that requires programmatic access to scholarly graph data.
## Key Features
- Paper search via the Semantic Scholar Graph API.
- Paper details retrieval (e.g., abstract, venue, citations-related fields depending on requested fields).
- Author details retrieval (author profile and associated papers depending on requested fields).
- Citation graph traversal:
- Fetch papers that cite a target paper (`citations`)
- Fetch papers referenced by a target paper (`references`)
- Optional API key support for higher rate limits via environment variable.
## Dependencies
- Python `>=3.9`
- `requests >=2.25.0`
## Example Usage
```python
import os
from scripts.client import (
search_papers,
get_paper_details,
get_author_details,
get_citations,
)
# Optional: set for higher rate limits
# os.environ["S2_API_KEY"] = "YOUR_API_KEY"
def main():
# 1) Search papers
results = search_papers(query="Attention Is All You Need", limit=5)
print("Search results (top 5):")
for i, p in enumerate(results, 1):
# The exact keys depend on the fields requested by the client implementation.
print(f"{i}. {p.get('title')} ({p.get('year')}) - paperId={p.get('paperId')}")
# 2) Get paper details
paper_id = "649def34f8be52c8b66281af98ae884c09aef38b"
paper = get_paper_details(paper_id=paper_id)
print("\nPaper details:")
print("Title:", paper.get("title"))
print("Venue:", paper.get("venue"))
print("Year:", paper.get("year"))
print("Abstract:", (paper.get("abstract") or "")[:300], "...")
# 3) Get author details
author_id = "1741101"
author = get_author_details(author_id=author_id)
print("\nAuthor details:")
print("Name:", author.get("name"))
print("AuthorId:", author.get("authorId"))
# 4) Traverse citations / references
citing = get_citations(paper_id=paper_id, method="citations")
refs = get_citations(paper_id=paper_id, method="references")
print("\nCitation traversal:")
print("Citations count:", len(citing) if isinstance(citing, list) else "N/A")
print("References count:", len(refs) if isinstance(refs, list) else "N/A")
if __name__ == "__main__":
main()
```
## Implementation Details
- **API Endpoint**: The skill communicates with the Semantic Scholar Graph API:
- Base URL: `https://api.semanticscholar.org/graph/v1/`
- **HTTP Client**: Uses `requests` to perform REST calls.
- **Authentication / Rate Limits**:
- If `S2_API_KEY` is set in the environment, requests should include it (typically via an `x-api-key` header) to obtain higher rate limits.
- Without an API key, the API may enforce stricter rate limiting.
- **Core Operations** (as implemented in `scripts/client.py`):
- `search_papers(query, limit=...)`: queries the search endpoint and returns a list of matching papers.
- `get_paper_details(paper_id)`: fetches metadata for a specific paper ID.
- `get_author_details(author_id)`: fetches metadata for a specific author ID.
- `get_citations(paper_id, method="citations"|"references")`: traverses the citation graph by selecting either inbound citations or outbound references.
- **Parameters**:
- `limit`: controls the maximum number of results returned by search.
- `method`: must be either `"citations"` or `"references"` to select traversal direction.More from aipoch/medical-research-skills
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