two-factor-authentication-best-practices

$npx mdskill add EpicenterHQ/epicenter/two-factor-authentication-best-practices

Enforces secure two-factor authentication workflows using Better Auth

  • Solves multi-factor enrollment, verification, and recovery challenges
  • Uses Better Auth's twoFactor() and twoFactorClient() plugins
  • Leverages TOTP, OTP, backup codes, and trusted device logic
  • Provides redirect handling and 2FA UX integration for sign-in flows
SKILL.md
.github/skills/two-factor-authentication-best-practicesView on GitHub ↗
---
name: two-factor-authentication-best-practices
description: 'Better Auth twoFactor plugin: TOTP, OTP, backup codes, trusted devices, and 2FA sign-in. Use when adding MFA, authenticator setup, two-factor enrollment, backup codes, or trusted-device flows.'
metadata:
  author: epicenter
  version: '1.0'
---

## When to Apply This Skill

Use this pattern when you need to:

- Configure Better Auth 2FA with `twoFactor()` and `twoFactorClient()`.
- Implement TOTP apps, OTP delivery (email/SMS), and backup code recovery.
- Handle `twoFactorRedirect` in credential sign-in flows.
- Add trusted-device behavior and 2FA verification UX.
- Tune 2FA security settings like rate limits, cookie age, and encrypted OTP storage.

## Setup

## Reference Repositories

- [Better Auth](https://github.com/better-auth/better-auth) — TypeScript authentication framework with plugins

## Upstream Grounding

When Better Auth two-factor plugin API shape, redirect behavior, TOTP verification, backup-code handling, trusted-device cookies, or security defaults affect correctness, ask DeepWiki a narrow question against `better-auth/better-auth` before relying on memory. Use it to orient, then verify decisive details against local installed types, source, or official docs before changing code.

Skip DeepWiki for stable setup basics already documented below.

1. Add `twoFactor()` plugin to server config with `issuer`
2. Add `twoFactorClient()` plugin to client config
3. Run `bun x @better-auth/cli migrate`
4. Verify: check that `twoFactorSecret` column exists on user table

```ts
import { betterAuth } from "better-auth";
import { twoFactor } from "better-auth/plugins";

export const auth = betterAuth({
  appName: "My App",
  plugins: [
    twoFactor({
      issuer: "My App",
    }),
  ],
});
```

### Client-Side Setup

```ts
import { createAuthClient } from "better-auth/client";
import { twoFactorClient } from "better-auth/client/plugins";

export const authClient = createAuthClient({
  plugins: [
    twoFactorClient({
      onTwoFactorRedirect() {
        window.location.href = "/2fa";
      },
    }),
  ],
});
```

## Enabling 2FA for Users

Requires password verification. Returns TOTP URI (for QR code) and backup codes.

```ts
const enable2FA = async (password: string) => {
  const { data, error } = await authClient.twoFactor.enable({
    password,
  });

  if (data) {
    // data.totpURI — generate a QR code from this
    // data.backupCodes — display to user
  }
};
```

`twoFactorEnabled` is not set to `true` until first TOTP verification succeeds. Override with `skipVerificationOnEnable: true` (not recommended).

## TOTP (Authenticator App)

### Displaying the QR Code

```tsx
import QRCode from "react-qr-code";

const TotpSetup = ({ totpURI }: { totpURI: string }) => {
  return <QRCode value={totpURI} />;
};
```

### Verifying TOTP Codes

Accepts codes from one period before/after current time:

```ts
const verifyTotp = async (code: string) => {
  const { data, error } = await authClient.twoFactor.verifyTotp({
    code,
    trustDevice: true,
  });
};
```

### TOTP Configuration Options

```ts
twoFactor({
  totpOptions: {
    digits: 6, // 6 or 8 digits (default: 6)
    period: 30, // Code validity period in seconds (default: 30)
  },
});
```

## OTP (Email/SMS)

### Configuring OTP Delivery

```ts
import { betterAuth } from "better-auth";
import { twoFactor } from "better-auth/plugins";
import { sendEmail } from "./email";

export const auth = betterAuth({
  plugins: [
    twoFactor({
      otpOptions: {
        sendOTP: async ({ user, otp }, ctx) => {
          await sendEmail({
            to: user.email,
            subject: "Your verification code",
            text: `Your code is: ${otp}`,
          });
        },
        period: 5, // Code validity in minutes (default: 3)
        digits: 6, // Number of digits (default: 6)
        allowedAttempts: 5, // Max verification attempts (default: 5)
      },
    }),
  ],
});
```

### Sending and Verifying OTP

Send: `authClient.twoFactor.sendOtp()`. Verify: `authClient.twoFactor.verifyOtp({ code, trustDevice: true })`.

### OTP Storage Security

Configure how OTP codes are stored in the database:

```ts
twoFactor({
  otpOptions: {
    storeOTP: "encrypted", // Options: "plain", "encrypted", "hashed"
  },
});
```

For custom encryption:

```ts
twoFactor({
  otpOptions: {
    storeOTP: {
      encrypt: async (token) => myEncrypt(token),
      decrypt: async (token) => myDecrypt(token),
    },
  },
});
```

## Backup Codes

Generated automatically when 2FA is enabled. Each code is single-use.

### Displaying Backup Codes

```tsx
const BackupCodes = ({ codes }: { codes: string[] }) => {
  return (
    <div>
      <p>Save these codes in a secure location:</p>
      <ul>
        {codes.map((code, i) => (
          <li key={i}>{code}</li>
        ))}
      </ul>
    </div>
  );
};
```

### Regenerating Backup Codes

Invalidates all previous codes:

```ts
const regenerateBackupCodes = async (password: string) => {
  const { data, error } = await authClient.twoFactor.generateBackupCodes({
    password,
  });
  // data.backupCodes contains the new codes
};
```

### Using Backup Codes for Recovery

```ts
const verifyBackupCode = async (code: string) => {
  const { data, error } = await authClient.twoFactor.verifyBackupCode({
    code,
    trustDevice: true,
  });
};
```

### Backup Code Configuration

```ts
twoFactor({
  backupCodeOptions: {
    amount: 10, // Number of codes to generate (default: 10)
    length: 10, // Length of each code (default: 10)
    storeBackupCodes: "encrypted", // Options: "plain", "encrypted"
  },
});
```

## Handling 2FA During Sign-In

Response includes `twoFactorRedirect: true` when 2FA is required:

### Sign-In Flow

1. Call `signIn.email({ email, password })`
2. Check `context.data.twoFactorRedirect` in `onSuccess`
3. If `true`, redirect to `/2fa` verification page
4. Verify via TOTP, OTP, or backup code
5. Session cookie is created on successful verification

```ts
const signIn = async (email: string, password: string) => {
  const { data, error } = await authClient.signIn.email(
    { email, password },
    {
      onSuccess(context) {
        if (context.data.twoFactorRedirect) {
          window.location.href = "/2fa";
        }
      },
    }
  );
};
```

Server-side: check `"twoFactorRedirect" in response` when using `auth.api.signInEmail`.

## Trusted Devices

Pass `trustDevice: true` when verifying. Default trust duration: 30 days (`trustDeviceMaxAge`). Refreshes on each sign-in.

## Security Considerations

### Session Management

Flow: credentials → session removed → temporary 2FA cookie (10 min default) → verify → session created.

```ts
twoFactor({
  twoFactorCookieMaxAge: 600, // 10 minutes in seconds (default)
});
```

### Rate Limiting

Built-in: 3 requests per 10 seconds for all 2FA endpoints. OTP has additional attempt limiting:

```ts
twoFactor({
  otpOptions: {
    allowedAttempts: 5, // Max attempts per OTP code (default: 5)
  },
});
```

### Encryption at Rest

TOTP secrets: encrypted with auth secret. Backup codes: encrypted by default. OTP: configurable (`"plain"`, `"encrypted"`, `"hashed"`). Uses constant-time comparison for verification.

2FA can only be enabled for credential (email/password) accounts.

## Disabling 2FA

Requires password confirmation. Revokes trusted device records:

```ts
const disable2FA = async (password: string) => {
  const { data, error } = await authClient.twoFactor.disable({
    password,
  });
};
```

## Complete Configuration Example

```ts
import { betterAuth } from "better-auth";
import { twoFactor } from "better-auth/plugins";
import { sendEmail } from "./email";

export const auth = betterAuth({
  appName: "My App",
  plugins: [
    twoFactor({
      // TOTP settings
      issuer: "My App",
      totpOptions: {
        digits: 6,
        period: 30,
      },
      // OTP settings
      otpOptions: {
        sendOTP: async ({ user, otp }) => {
          await sendEmail({
            to: user.email,
            subject: "Your verification code",
            text: `Your code is: ${otp}`,
          });
        },
        period: 5,
        allowedAttempts: 5,
        storeOTP: "encrypted",
      },
      // Backup code settings
      backupCodeOptions: {
        amount: 10,
        length: 10,
        storeBackupCodes: "encrypted",
      },
      // Session settings
      twoFactorCookieMaxAge: 600, // 10 minutes
      trustDeviceMaxAge: 30 * 24 * 60 * 60, // 30 days
    }),
  ],
});
```
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